105 research outputs found
Asteroids co-orbital motion classification based on Machine Learning
In this work, we explore how to classify asteroids in co-orbital motion with
a given planet using Machine Learning. We consider four different kinds of
motion in mean motion resonance with the planet, nominally Tadpole, Horseshoe
and Quasi-satellite, building 3 datasets defined as Real (taking the
ephemerides of real asteroids from the JPL Horizons system), Ideal and
Perturbed (both simulated, obtained by propagating initial conditions
considering two different dynamical systems) for training and testing the
Machine Learning algorithms in different conditions.
The time series of the variable theta (angle related to the resonance) are
studied with a data analysis pipeline defined ad hoc for the problem and
composed by: data creation and annotation, time series features extraction
thanks to the tsfresh package (potentially followed by selection and
standardization) and the application of Machine Learning algorithms for
Dimensionality Reduction and Classification. Such approach, based on features
extracted from the time series, allows to work with a smaller number of data
with respect to Deep Learning algorithms, also allowing to define a ranking of
the importance of the features. Physical Interpretability of the features is
another key point of this approach. In addition, we introduce the SHapley
Additive exPlanations for Explainability technique.
Different training and test sets are used, in order to understand the power
and the limits of our approach. The results show how the algorithms are able to
identify and classify correctly the time series, with a high degree of
performance
Efficacy of MRI data harmonization in the age of machine learning. A multicenter study across 36 datasets
Pooling publicly-available MRI data from multiple sites allows to assemble
extensive groups of subjects, increase statistical power, and promote data
reuse with machine learning techniques. The harmonization of multicenter data
is necessary to reduce the confounding effect associated with non-biological
sources of variability in the data. However, when applied to the entire dataset
before machine learning, the harmonization leads to data leakage, because
information outside the training set may affect model building, and potentially
falsely overestimate performance. We propose a 1) measurement of the efficacy
of data harmonization; 2) harmonizer transformer, i.e., an implementation of
the ComBat harmonization allowing its encapsulation among the preprocessing
steps of a machine learning pipeline, avoiding data leakage. We tested these
tools using brain T1-weighted MRI data from 1740 healthy subjects acquired at
36 sites. After harmonization, the site effect was removed or reduced, and we
measured the data leakage effect in predicting individual age from MRI data,
highlighting that introducing the harmonizer transformer into a machine
learning pipeline allows for avoiding data leakage
On the CFD Analysis of a Stratified Taylor-Couette System Dedicated to the Fabrication of Nanosensors
Since the pioneering work of Taylor, the analysis of flow regimes of incompressible, viscous fluids contained in circular Couette systems with independently rotating cylinders have charmed many researchers. The characteristics of such kind of flows have been considered for some industrial applications. Recently, Taylor-Couette flows found an innovative application in the production of optical fiber nanotips, to be used in molecular biology and medical diagnostic fields. Starting from the activity of Barucci et al., the present work concerns the numerical analysis of a Taylor-Couette system composed by two coaxial counter-rotating cylinders with low aspect ratio and radius ratio, filled with three stratified fluids. An accurate analysis of the flow regimes is performed, considering both the variation of inner and outer rotational speed and the reduction of fiber radius due to etching process. The large variety of individuated flow configurations provides useful information about the possible use of the Taylor-Couette system in a wide range of engineering applications. For the present case, the final objective is to provide accurate information to manufacturers of fiber nanotips about the expected flow regimes, thus helping them in the setup of the control process that will be used to generate high-quality products
A SERS affinity bioassay based on ion-exchanged glass microrods
14noThe well-known enhancement effect of surface-enhanced Raman spectroscopy (SERS) is associated with the presence of metallic nanostructures at the substrate surface. Different bottom-up and top-down processes have been proposed to impart the substrate with such a nanostructured layer. The former approaches are low cost but may suffer from reusability and stability. The latter strategies are expensive, time consuming and require special equipment that complicate the fabrication process. Here, we present the possibility to obtain stable and reusable SERS substrates by a low-cost silver-sodium ion-exchange process in soda-lime glass microrods. The microrods were obtained by cutting the tip of the ion-exchanged soda-lime fiber, resulting in disks of about few millimeters in length and one hundred microns in diameter. A thermal annealing post-process was applied to trigger the reduction of Ag+ ions into nanoparticles (AgNPs) within the ion-exchanged glass microrods. Afterwards, ion-exchange and thermal treatments were carefully tuned to assure the presence of silver NPs exposed on the surface of the microrods, without using any chemical etching. An AFM analysis confirmed the presence of AgNPs with size of tens of nm on the surface of the fiber probe. A SERS affinity bioassay was developed on the probe with the final aim of detecting microRNA fragments acting as biomarkers of different diseases. Specifically a DNA hybridization assay was built up by anchoring a molecular beacon containing a Raman tag on the Ag surface via thiol chemistry. Initial SERS experiments confirmed the presence of the beacon on the NPs embedded on the microrods surface, as monitored by detecting main spectral bands ascribed to the oligonucleotide chain. Finally, the ability of the platform to interact with the target microRNA sequence was assessed. The analysis was repeated on a number of miRNA sequences differing from the target to evaluate the specificity of the proposed assay.openopenBerneschi, Simone; D'Andrea, Cristiano; Giannetti, Ambra; De Angelis, Marella; Banchelli, Martina; Barucci, Andrea; Boetti, Nadia Giovanna; Pelli, Stefano; Baldini, Francesco; Pini, Roberto; Janner, Davide; Pugliese, Diego; Milanese, Daniel; Matteini, PaoloBerneschi, Simone; D'Andrea, Cristiano; Giannetti, Ambra; De Angelis, Marella; Banchelli, Martina; Barucci, Andrea; Boetti, Nadia Giovanna; Pelli, Stefano; Baldini, Francesco; Pini, Roberto; Janner, Davide; Pugliese, Diego; Milanese, Daniel; Matteini, Paol
Ion-exchanged glass microrods for SERS detection of DNA
Different chemical or physical deposition processes have been previously proposed to equip surfaces with a layer of plasmonic NPs to produce effective SERS responses. Here, we present a SERS biosensor obtained by an ion-exchange process in soda-lime glass microrods for efficient DNA detection
Confocal reflectance microscopy for determination of microbubble resonator thickness
Optical Micro Bubble Resonators (OMBR) are emerging as new type of sensors characterized by high Q-factor and embedded micro-fluidic. Sensitivity is related to cavity field penetration and, therefore, to the resonator thickness. At the state of the art, methods for OMBR's wall thickness evaluation rely only on a theoretical approach. The purpose of this study is to create a non-destructive method for measuring the shell thickness of a microbubble using reflectance confocal microscopy. The method was validated through measurements on etched capillaries with different thickness and finally it was applied on microbubble resonators
Investigating the composition of Potentially Hazardous Asteroids with the NEO-SURFACE survey
There is a high degree of diversity among the physical properties of the Potentially Hazardous asteroids (PHAs). For these objects, the physical characterization is essential to define a successful mitigation mission, therefore ground-based surveys like NEO-SURFACE could provide a fundamental contribution. Our analysis suggest a prevalence of silicate S-types in the PHA population, which could be due in principle to the high efficiency of the transport mechanisms in the inner main belt, or to an observational bias due to the fact that S-types are brighter. <P /
Temporal variability of 67P/Churyumov-Gerasimenko nucleus spectral properties from VIRTIS-M onboard Rosetta
We investigate the variability, on both diurnal and seasonal scale, of the spectral properties of the nucleus of comet 67P/Churyumov-Geresimenko as observed by the VIRTIS-M imaging spectrometer onboard the Rosetta spacecraft. The spectrum is described by means of spectral indicators: visible and infrared slopes, band areas and band position
- …